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Identification, heterologous expression and characterization of a dye-decolorizing peroxidase of Pleurotus sapidus

Overview of attention for article published in AMB Express, August 2017
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Title
Identification, heterologous expression and characterization of a dye-decolorizing peroxidase of Pleurotus sapidus
Published in
AMB Express, August 2017
DOI 10.1186/s13568-017-0463-5
Pubmed ID
Authors

Christiane Lauber, Tatiana Schwarz, Quoc Khanh Nguyen, Patrick Lorenz, Guenter Lochnit, Holger Zorn

Abstract

The coding sequence of a peroxidase from the secretome of Pleurotus sapidus was cloned from a cDNA library. Bioinformatic analyses revealed an open reading frame of 1551 bp corresponding to a primary translation product of 516 amino acids. The DyP-type peroxidase was heterologously produced in Trichoderma reesei with an activity of 55,000 U L(-1). The enzyme was purified from the culture supernatant, biochemically characterized and the kinetic parameters were determined. The enzyme has an N-terminal signal peptide composed of 62 amino acids. Analysis by Blue Native PAGE and activity staining with ABTS, as well as gel filtration chromatography showed the native dimeric state of the enzyme (115 kDa). Analysis of the substrate range revealed that the recombinant enzyme catalyzes, in addition to the conversion of some classic peroxidase substrates such as 2,2'-azino-bis(3-ethylthiazoline-6-sulfonate) and substituted phenols like 2,6-dimethoxyphenol, also the decolorization of the anthraquinonic dye Reactive Blue 5. The enzyme also catalyzes bleaching of natural colorants such as β-carotene and annatto. Surprisingly, β-carotene was transformed in the presence and absence of H2O2 by rPsaDyP, however enzyme activity was increased by the addition of H2O2. This indicates that the rPsaDyP has an oxidase function in addition to a peroxidase activity. As a consequence of the high affinity to the characteristic substrate Reactive Blue 5 the rPsaDyP belongs functionally to the dyp-type peroxidase family.

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Geographical breakdown

Country Count As %
Unknown 45 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 8 18%
Student > Bachelor 6 13%
Researcher 6 13%
Student > Master 6 13%
Professor 3 7%
Other 5 11%
Unknown 11 24%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 12 27%
Agricultural and Biological Sciences 7 16%
Chemistry 6 13%
Engineering 4 9%
Environmental Science 2 4%
Other 1 2%
Unknown 13 29%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 August 2017.
All research outputs
#15,477,045
of 22,999,744 outputs
Outputs from AMB Express
#446
of 1,239 outputs
Outputs of similar age
#199,102
of 317,355 outputs
Outputs of similar age from AMB Express
#18
of 41 outputs
Altmetric has tracked 22,999,744 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,239 research outputs from this source. They receive a mean Attention Score of 2.8. This one is in the 40th percentile – i.e., 40% of its peers scored the same or lower than it.
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We're also able to compare this research output to 41 others from the same source and published within six weeks on either side of this one. This one is in the 7th percentile – i.e., 7% of its contemporaries scored the same or lower than it.