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Differential Regulation of Starch-synthetic Gene Expression in Endosperm Between Indica and Japonica Rice Cultivars

Overview of attention for article published in Rice, February 2017
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Title
Differential Regulation of Starch-synthetic Gene Expression in Endosperm Between Indica and Japonica Rice Cultivars
Published in
Rice, February 2017
DOI 10.1186/s12284-017-0146-5
Pubmed ID
Authors

Tsuyoshi Inukai

Abstract

Grain filling rates (GFRs) of indica rice cultivars are often higher than those of japonica cultivars. Although GFR is mainly determined by the starch accumulation rate (SAR) in endosperm, the genetic basis for SAR during the ripening period has not been well studied in rice. To elucidate the factors influencing the differing SARs between typical indica and japonica cultivars, we focused on differences in sink potentials, especially on starch synthesis in the endosperm. SAR in indica rice cultivar IR36 was significantly higher than in japonica cultivar T65. Although enzymes for both amylose and amylopectin syntheses had higher activity in IR36, amylopectin synthesis was seemingly more important for accelerating SAR because an elevation of amylose synthesis ability alone in the T65 genetic background did not result in the same level of SAR as IR36. In IR36, most starch-synthetic genes (SSGs) in the endosperm were more highly expressed during ripening than in T65. In panicle culture experiments, the SSGs in rice endosperm were regulated in either sucrose-dependent or -independent manners, or both. All SSGs except SSI and BEIIa were responsive to sucrose in both cultivars, and GBSSI, AGPS2b and PUL were more responsive to sucrose in IR36. Interestingly, the GBSSI gene (Wx (a) ) in IR36 was highly activated by sucrose, but the GBSSI gene (Wx (b) ) in T65 was insensitive. In sucrose-independent regulation, AGPL2, SSIIIa, BEI, BEIIb and ISA1 genes in IR36 were upregulated 1.5 to 2 times more than those in T65. Additionally, at least SSI and BEIIa might be regulated by unknown signals; that regulation pathway should be more activated in IR36 than T65. In this study, at least three regulatory pathways seem to be involved in SSG expression in rice endosperm, and all pathways were more active in IR36. One of the factors leading to the high SAR of IR36 seemed to be an increase in the sink potential.

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Mendeley readers

Mendeley readers

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Geographical breakdown

Country Count As %
Unknown 39 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 11 28%
Student > Ph. D. Student 5 13%
Student > Master 4 10%
Professor > Associate Professor 2 5%
Student > Doctoral Student 1 3%
Other 4 10%
Unknown 12 31%
Readers by discipline Count As %
Agricultural and Biological Sciences 16 41%
Biochemistry, Genetics and Molecular Biology 5 13%
Arts and Humanities 1 3%
Sports and Recreations 1 3%
Medicine and Dentistry 1 3%
Other 1 3%
Unknown 14 36%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 28 May 2017.
All research outputs
#17,897,310
of 22,977,819 outputs
Outputs from Rice
#228
of 388 outputs
Outputs of similar age
#223,949
of 310,826 outputs
Outputs of similar age from Rice
#2
of 3 outputs
Altmetric has tracked 22,977,819 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 388 research outputs from this source. They receive a mean Attention Score of 3.8. This one is in the 35th percentile – i.e., 35% of its peers scored the same or lower than it.
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