| Title |
SNP-based analysis of genetic diversity in anther-derived rice by whole genome sequencing
|
|---|---|
| Published in |
Rice, March 2013
|
| DOI | 10.1186/1939-8433-6-6 |
| Pubmed ID | |
| Authors |
In-Seon Jeong, Ung-Han Yoon, Gang-Seob Lee, Hyeon-So Ji, Hyun-Ju Lee, Chang-Deok Han, Jang-Ho Hahn, Gynheung An, Tae-Ho Kim |
| Abstract |
Anther culture has advantage to obtain a homozygous progeny by induced doubling of haploid chromosomes and to improve selection efficiency for invaluable agronomical traits. Therefore, anther culturing is widely utilized to breed new varieties and to induce genetic variations in several crops including rice. Genome sequencing technologies allow the detection of a massive number of DNA polymorphism such as SNPs and Indels between closely related cultivars. These DNA polymorphisms permit the rapid identification of genetic diversity among cultivars and genomic locations of heritable traits. To estimate sequence diversity derived from anther culturing, we performed whole-genome resequencing of five Korean rice accessions, including three anther culture lines (BLB, HY-04 and HY-08), their progenitor cultivar (Hwayeong), and an additional japonica cultivar (Dongjin). |
Mendeley readers
The data shown below were compiled from readership statistics for 48 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| India | 2 | 4% |
| Indonesia | 1 | 2% |
| Ethiopia | 1 | 2% |
| France | 1 | 2% |
| China | 1 | 2% |
| Unknown | 42 | 88% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 13 | 27% |
| Student > Ph. D. Student | 10 | 21% |
| Student > Master | 5 | 10% |
| Student > Doctoral Student | 3 | 6% |
| Student > Bachelor | 3 | 6% |
| Other | 5 | 10% |
| Unknown | 9 | 19% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 27 | 56% |
| Biochemistry, Genetics and Molecular Biology | 6 | 13% |
| Environmental Science | 1 | 2% |
| Pharmacology, Toxicology and Pharmaceutical Science | 1 | 2% |
| Computer Science | 1 | 2% |
| Other | 2 | 4% |
| Unknown | 10 | 21% |
Attention Score in Context
This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 March 2013.
All research outputs
#20,185,720
of 22,701,287 outputs
Outputs from Rice
#299
of 381 outputs
Outputs of similar age
#171,811
of 196,101 outputs
Outputs of similar age from Rice
#4
of 6 outputs
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So far Altmetric has tracked 381 research outputs from this source. They receive a mean Attention Score of 3.8. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 6 others from the same source and published within six weeks on either side of this one. This one has scored higher than 2 of them.