But how to cross-reference metagenomic reads against this enormous database (euk genomes are BIG)? Unless you want to wait forever, you gotta use kmers/hashes. Kraken2 is very fast, once you've constructed/loaded the database into memory (https://t.co/K
RT @eDNA_startup: Ram? • https://t.co/hvWkTagQOl • https://t.co/i0tOzpio7Y minimap2 • https://t.co/27Oho9hBZ5 • https://t.co/YaeV9SLwnS K…
Ram? • https://t.co/hvWkTagQOl • https://t.co/i0tOzpio7Y minimap2 • https://t.co/27Oho9hBZ5 • https://t.co/YaeV9SLwnS Kraken2 • https://t.co/YDOxFPBd5s • https://t.co/L41jCUg2Qc
@TRyanGregory Careful there! https://t.co/uFmy9572lH
I was looking for this kraken.. https://t.co/UkLyeKzQTj, instead I got the financial one 👇🏿 https://t.co/8gKAcAjJfY
RT @SeqComplete: Improved metagenomic analysis with Kraken 2 https://t.co/TYs3G3utqm #metagenomics
Improved metagenomic analysis with Kraken 2 https://t.co/TYs3G3utqm #metagenomics
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https://t.co/1iiH67dQM2
Improved metagenomic analysis with Kraken 2 https://t.co/TYs3G3utqm #metagenomics
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @BioDecoded: Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https:/…
RT @bic_ccmb: A new version of popular metagenomics tool Kraken, i.e Kraken 2 is out now! #genomics #metagenomics #bioinformatics #ngs #da…
Improved metagenomic analysis with Kraken 2 | Genome Biology https://t.co/WBP1W4KiDQ #metagenomics #bioinformatics https://t.co/9rNYfRRCO3
More efficient techniques for metagenomics analysis https://t.co/ySl8HRmuI0 @BenLangmead
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
A new version of popular metagenomics tool Kraken, i.e Kraken 2 is out now! #genomics #metagenomics #bioinformatics #ngs #datascience https://t.co/ORFu5jLFuW
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
RT @DerrickEWood: I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOL…
I almost forgot to mention this, but our Kraken 2 paper was published on Thanksgiving in @GenomeBiology https://t.co/mPOLgYvAyw Thanks to @JenniferLu717 and @BenLangmead for all their work on the project, and to our reviewers for helping us make it a more
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
#metagenomics Improved metagenomic analysis with Kraken 2 | Genome Biology | Full Text https://t.co/XDO3Vmv1J9, see more https://t.co/x5gdmk9AHC
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
Kraken 2 has translated search which makes it much more interesting for #viral #metagenomics.
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @ChristianRinke: #Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."…
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @ChristianRinke: #Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."…
Improved metagenomic analysis with Kraken 2. https://t.co/OuV3a5tYdX
RT @ChristianRinke: #Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."…
RT @metagenomic_lit: Improved metagenomic analysis with Kraken 2. https://t.co/9yUbtnDx2v
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @ChristianRinke: #Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."…
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @ChristianRinke: #Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."…
#Bioinformatics news: improved metagenome analysis "Kraken 2 improves upon Kraken 1 by reducing memory usage by 85% .."
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @metagenomic_lit: Improved metagenomic analysis with Kraken 2. https://t.co/9yUbtnDx2v
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
Improved metagenomic analysis with Kraken 2. https://t.co/9yUbtnDx2v
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
Improved metagenomic analysis with Kraken 2 https://t.co/gbewyesbdc
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
Improved metagenomic analysis with Kraken 2 https://t.co/3pT00GIOEv
RT @GenomeBiology: The Kraken 2 metagenomics analysis system from @DerrickEWood, Jennifer Wu and @benlangmead improves on Kraken 1 with imp…
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj
RT @strnr: Kraken 2 published: Improved metagenomic analysis with Kraken 2 https://t.co/FXsSctYxKP https://t.co/U8bUdPCmmj