↓ Skip to main content

LipidPioneer : A Comprehensive User-Generated Exact Mass Template for Lipidomics

Overview of attention for article published in Journal of the American Society for Mass Spectrometry, January 2017
Altmetric Badge

About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (70th percentile)
  • High Attention Score compared to outputs of the same age and source (89th percentile)

Mentioned by

twitter
9 tweeters
facebook
1 Facebook page

Citations

dimensions_citation
10 Dimensions

Readers on

mendeley
36 Mendeley
Title
LipidPioneer : A Comprehensive User-Generated Exact Mass Template for Lipidomics
Published in
Journal of the American Society for Mass Spectrometry, January 2017
DOI 10.1007/s13361-016-1579-6
Pubmed ID
Authors

Candice Z. Ulmer, Jeremy P. Koelmel, Jared M. Ragland, Timothy J. Garrett, John A. Bowden

Abstract

Lipidomics, the comprehensive measurement of lipid species in a biological system, has promising potential in biomarker discovery and disease etiology elucidation. Advances in chromatographic separation, mass spectrometric techniques, and novel substrate applications continue to expand the number of lipid species observed. The total number and type of lipid species detected in a given sample are generally indicative of the sample matrix examined (e.g., serum, plasma, cells, bacteria, tissue, etc.). Current exact mass lipid libraries are static and represent the most commonly analyzed matrices. It is common practice for users to manually curate their own lists of lipid species and adduct masses; however, this process is time-consuming. LipidPioneer, an interactive template, can be used to generate exact masses and molecular formulas of lipid species that may be encountered in the mass spectrometric analysis of lipid profiles. Over 60 lipid classes are present in the LipidPioneer template and include several unique lipid species, such as ether-linked lipids and lipid oxidation products. In the template, users can add any fatty acyl constituents without limitation in the number of carbons or degrees of unsaturation. LipidPioneer accepts naming using the lipid class level (sum composition) and the LIPID MAPS notation for fatty acyl structure level. In addition to lipid identification, user-generated lipid m/z values can be used to develop inclusion lists for targeted fragmentation experiments. Resulting lipid names and m/z values can be imported into software such as MZmine or Compound Discoverer to automate exact mass searching and isotopic pattern matching across experimental data. Graphical Abstract ᅟ.

Twitter Demographics

The data shown below were collected from the profiles of 9 tweeters who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 36 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 6%
Australia 1 3%
Canada 1 3%
Unknown 32 89%

Demographic breakdown

Readers by professional status Count As %
Researcher 10 28%
Student > Ph. D. Student 7 19%
Student > Bachelor 6 17%
Unspecified 5 14%
Professor > Associate Professor 3 8%
Other 5 14%
Readers by discipline Count As %
Chemistry 13 36%
Agricultural and Biological Sciences 8 22%
Unspecified 7 19%
Biochemistry, Genetics and Molecular Biology 4 11%
Engineering 2 6%
Other 2 6%

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 24 March 2017.
All research outputs
#3,014,159
of 12,287,471 outputs
Outputs from Journal of the American Society for Mass Spectrometry
#348
of 2,142 outputs
Outputs of similar age
#97,599
of 335,139 outputs
Outputs of similar age from Journal of the American Society for Mass Spectrometry
#4
of 58 outputs
Altmetric has tracked 12,287,471 research outputs across all sources so far. Compared to these this one has done well and is in the 75th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 2,142 research outputs from this source. They receive a mean Attention Score of 2.9. This one has done well, scoring higher than 83% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 335,139 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.
We're also able to compare this research output to 58 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 89% of its contemporaries.